mouse_press Left_button 795 765 CLASS_NAME: QMainWindow OBJECT_NAME: main_window Assembly: 250000 reads added in 10.3028 seconds. Auto-packing: yes mouse_release Left_button 896 96 CLASS_NAME: U2::FixedMdiArea OBJECT_NAME: MDI_Area Assembly: 250000 reads added in 14.1463 seconds. Auto-packing: no Assembly: 250000 reads added in 7.846 seconds. Auto-packing: no Assembly: 250000 reads added in 7.94251 seconds. Auto-packing: no Assembly: 250000 reads added in 11.0959 seconds. Auto-packing: no Assembly: 250000 reads added in 8.90613 seconds. Auto-packing: no Assembly: 250000 reads added in 8.48258 seconds. Auto-packing: no Assembly: 250000 reads added in 8.52458 seconds. Auto-packing: no Assembly: 106755 reads added in 3.34943 seconds. Auto-packing: no Assembly: 143245 reads added in 4.00801 seconds. Auto-packing: yes Assembly: 250000 reads added in 38.3104 seconds. Auto-packing: no Assembly: 250000 reads added in 7.55896 seconds. Auto-packing: no Assembly: 243420 reads added in 7.60897 seconds. Auto-packing: no Assembly: 6580 reads added in 0.174022 seconds. Auto-packing: yes Assembly: 250000 reads added in 8.53809 seconds. Auto-packing: no Assembly: 250000 reads added in 7.66347 seconds. Auto-packing: no Assembly: 250000 reads added in 8.01652 seconds. Auto-packing: no Assembly: 250000 reads added in 8.08803 seconds. Auto-packing: no Assembly: 164914 reads added in 5.5362 seconds. Auto-packing: no Assembly: 85086 reads added in 2.43631 seconds. Auto-packing: yes mouse_press Left_button 871 709 CLASS_NAME: QPlainTextEdit mouse_release Left_button 872 710 CLASS_NAME: QPlainTextEdit Assembly: 250000 reads added in 61.2443 seconds. Auto-packing: no Assembly: 250000 reads added in 7.62547 seconds. Auto-packing: no Assembly: 250000 reads added in 7.67748 seconds. Auto-packing: no Assembly: 44000 reads added in 1.35967 seconds. Auto-packing: no Assembly: 206000 reads added in 10.1898 seconds. Auto-packing: yes Assembly: 250000 reads added in 77.2268 seconds. Auto-packing: no Assembly: 232672 reads added in 7.59496 seconds. Auto-packing: no Assembly: 17328 reads added in 0.538069 seconds. Auto-packing: yes Assembly: 250000 reads added in 21.1797 seconds. Auto-packing: no Assembly: 250000 reads added in 7.73798 seconds. Auto-packing: no Assembly: 58865 reads added in 1.85224 seconds. Auto-packing: no Assembly: 191135 reads added in 5.67772 seconds. Auto-packing: yes Assembly: 250000 reads added in 29.3787 seconds. Auto-packing: no Assembly: 250000 reads added in 7.92601 seconds. Auto-packing: no Assembly: 81164 reads added in 2.66134 seconds. Auto-packing: no Assembly: 168836 reads added in 11.77 seconds. Auto-packing: yes Assembly: 250000 reads added in 47.7451 seconds. Auto-packing: no Assembly: 250000 reads added in 8.03402 seconds. Auto-packing: no Assembly: 250000 reads added in 8.17154 seconds. Auto-packing: no Assembly: 118495 reads added in 3.86999 seconds. Auto-packing: no Assembly: 131505 reads added in 6.07327 seconds. Auto-packing: yes Assembly: 250000 reads added in 17.6607 seconds. Auto-packing: no Assembly: 250000 reads added in 8.09153 seconds. Auto-packing: no Assembly: 11743 reads added in 0.378548 seconds. Auto-packing: no Assembly: 238257 reads added in 14.7419 seconds. Auto-packing: yes Assembly: 118710 reads added in 29.6093 seconds. Auto-packing: no Assembly: 131290 reads added in 14.0948 seconds. Auto-packing: yes Assembly: 250000 reads added in 42.8069 seconds. Auto-packing: no Assembly: 207233 reads added in 6.70285 seconds. Auto-packing: no Assembly: 42767 reads added in 1.29166 seconds. Auto-packing: yes Assembly: 250000 reads added in 20.7881 seconds. Auto-packing: no Assembly: 250000 reads added in 8.15804 seconds. Auto-packing: no Assembly: 250000 reads added in 8.20804 seconds. Auto-packing: no Assembly: 250000 reads added in 8.34406 seconds. Auto-packing: no Assembly: 250000 reads added in 8.50808 seconds. Auto-packing: no Assembly: 250000 reads added in 8.6931 seconds. Auto-packing: no Assembly: 250000 reads added in 8.51658 seconds. Auto-packing: no Assembly: 250000 reads added in 8.60609 seconds. Auto-packing: no Assembly: 66539 reads added in 2.56082 seconds. Auto-packing: no Assembly: 183461 reads added in 5.5387 seconds. Auto-packing: yes Assembly: 250000 reads added in 41.6508 seconds. Auto-packing: no Assembly: 250000 reads added in 8.60959 seconds. Auto-packing: no Assembly: 131827 reads added in 4.51107 seconds. Auto-packing: no Assembly: 118173 reads added in 7.61097 seconds. Auto-packing: yes Assembly: 205871 reads added in 32.9297 seconds. Auto-packing: no Assembly: 44129 reads added in 1.63821 seconds. Auto-packing: yes Assembly: 226947 reads added in 16.6001 seconds. Auto-packing: no Assembly: 23053 reads added in 0.692588 seconds. Auto-packing: yes Assembly: 250000 reads added in 10.4023 seconds. Auto-packing: no Assembly: 250000 reads added in 8.41707 seconds. Auto-packing: no Assembly: 250000 reads added in 8.50608 seconds. Auto-packing: no Assembly: 250000 reads added in 8.73511 seconds. Auto-packing: no Assembly: 250000 reads added in 8.81862 seconds. Auto-packing: no Assembly: 250000 reads added in 8.75211 seconds. Auto-packing: no Assembly: 54843 reads added in 2.10677 seconds. Auto-packing: no Assembly: 195157 reads added in 6.23079 seconds. Auto-packing: yes Assembly: 250000 reads added in 51.238 seconds. Auto-packing: no Assembly: 250000 reads added in 8.59609 seconds. Auto-packing: no Assembly: 250000 reads added in 8.61159 seconds. Auto-packing: no Assembly: 250000 reads added in 9.4517 seconds. Auto-packing: no Assembly: 5284 reads added in 0.323541 seconds. Auto-packing: no Assembly: 244716 reads added in 16.4111 seconds. Auto-packing: yes Assembly: 250000 reads added in 55.5901 seconds. Auto-packing: no Assembly: 250000 reads added in 8.6396 seconds. Auto-packing: no Assembly: 250000 reads added in 8.93713 seconds. Auto-packing: no Assembly: 250000 reads added in 11.2794 seconds. Auto-packing: no Assembly: 189321 reads added in 10.8204 seconds. Auto-packing: no Assembly: 60679 reads added in 3.05739 seconds. Auto-packing: yes Assembly: 250000 reads added in 30.3889 seconds. Auto-packing: no Assembly: 250000 reads added in 8.56759 seconds. Auto-packing: no Assembly: 250000 reads added in 8.6991 seconds. Auto-packing: no Assembly: 250000 reads added in 8.91613 seconds. Auto-packing: no Assembly: 202428 reads added in 7.848 seconds. Auto-packing: no Assembly: 47572 reads added in 1.72872 seconds. Auto-packing: yes Assembly: 250000 reads added in 11.4099 seconds. Auto-packing: no Assembly: 250000 reads added in 8.60359 seconds. Auto-packing: no Assembly: 250000 reads added in 8.73311 seconds. Auto-packing: no Assembly: 250000 reads added in 8.77361 seconds. Auto-packing: no Assembly: 250000 reads added in 8.94263 seconds. Auto-packing: no Assembly: 180208 reads added in 6.41631 seconds. Auto-packing: no Assembly: 69792 reads added in 2.23978 seconds. Auto-packing: yes Assembly: 250000 reads added in 9.23167 seconds. Auto-packing: no Assembly: 250000 reads added in 8.6861 seconds. Auto-packing: no Assembly: 250000 reads added in 8.79112 seconds. Auto-packing: no Assembly: 116774 reads added in 4.11902 seconds. Auto-packing: no Assembly: 133226 reads added in 5.06114 seconds. Auto-packing: yes Assembly: 250000 reads added in 12.6191 seconds. Auto-packing: no Assembly: 250000 reads added in 8.84012 seconds. Auto-packing: no Assembly: 250000 reads added in 8.83812 seconds. Auto-packing: no Assembly: 53332 reads added in 1.90324 seconds. Auto-packing: no Assembly: 114502 reads added in 4.06502 seconds. Auto-packing: yes Assembly: 82166 reads added in 2.67884 seconds. Auto-packing: yes Assembly: 250000 reads added in 9.76524 seconds. Auto-packing: no Assembly: 250000 reads added in 8.91113 seconds. Auto-packing: no Assembly: 97684 reads added in 3.52645 seconds. Auto-packing: no Assembly: 30148 reads added in 0.986625 seconds. Auto-packing: yes Packing reads for assembly 'chr1' (1 of 25) Assembly: number packed reads so far: 100000 of 2106755 (4%) Assembly: number packed reads so far: 200000 of 2106755 (9%) Assembly: number packed reads so far: 300000 of 2106755 (14%) Assembly: number packed reads so far: 400000 of 2106755 (18%) Assembly: number packed reads so far: 500000 of 2106755 (23%) Assembly: number packed reads so far: 600000 of 2106755 (28%) Assembly: number packed reads so far: 700000 of 2106755 (33%) Assembly: number packed reads so far: 800000 of 2106755 (37%) Assembly: number packed reads so far: 900000 of 2106755 (42%) Assembly: number packed reads so far: 1000000 of 2106755 (47%) Assembly: number packed reads so far: 1100000 of 2106755 (52%) Assembly: number packed reads so far: 1200000 of 2106755 (56%) Assembly: number packed reads so far: 1300000 of 2106755 (61%) Assembly: number packed reads so far: 1400000 of 2106755 (66%) Assembly: number packed reads so far: 1500000 of 2106755 (71%) Assembly: number packed reads so far: 1600000 of 2106755 (75%) Assembly: number packed reads so far: 1700000 of 2106755 (80%) Assembly: number packed reads so far: 1800000 of 2106755 (85%) Assembly: number packed reads so far: 1900000 of 2106755 (90%) Assembly: number packed reads so far: 2000000 of 2106755 (94%) Assembly: number packed reads so far: 2100000 of 2106755 (99%) Assembly: algorithm pack time: 39.091 seconds Assembly: starting reads migration process. Reads to migrate: 4575, total: 2106755 (0%) Assembly: running reads migration from AssemblyRead_M1_50_100_0 to AssemblyRead_M1_50_100_1 number of reads: 4575 SQL: error: Unexpected query result code: 6 (database table is locked) in query: DROP TABLE IF EXISTS tmp_mig_AssemblyRead_M1_50_100_0 SQL: error: SQLite: Error finalizing statement: Error querying database: database table is locked in query: DROP TABLE IF EXISTS tmp_mig_AssemblyRead_M1_50_100_0 Assembly: reads migration from AssemblyRead_M1_50_100_0 to AssemblyRead_M1_50_100_1 finished, time 2.04876 seconds, progress: 4575/4575 (100%) Assembly: table migration pack time: 2.41531 seconds SQL: error: Error querying database: temporary storage cannot be changed from within a transaction in query: PRAGMA temp_store = FILE Assembly: re-indexing pack time: 0 seconds Assembly: full pack time: 368.658 seconds SQLite: shutting down: D:/test/bam/BT-20_sorted.bam_debug.ugenedb AppResource Threads ::release 1, available 999 Promoting task {Convert BAM to UGENE database (BT-20_sorted.bam)} to 'Finished', error 'Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction' BAMImporter task total time is 2134 sec Promoting task {BAM/SAM file import: BT-20_sorted.bam} to 'Finished', error 'Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction' Promoting task {Adding document to project: BT-20_sorted.bam} to 'Finished', error 'Subtask {BAM/SAM file import: BT-20_sorted.bam} is failed: Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction. Document was removed' Promoting task {Opening view for document: BT-20_sorted.bam} to 'Finished', error 'Subtask {Adding document to project: BT-20_sorted.bam} is failed: Subtask {BAM/SAM file import: BT-20_sorted.bam} is failed: Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction. Document was removed' Subtask {Adding document to project: BT-20_sorted.bam} is failed: Subtask {BAM/SAM file import: BT-20_sorted.bam} is failed: Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction. Document was removed Promoting task {Loading documents} to 'Finished', error 'Subtask {Opening view for document: BT-20_sorted.bam} is failed: Subtask {Adding document to project: BT-20_sorted.bam} is failed: Subtask {BAM/SAM file import: BT-20_sorted.bam} is failed: Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction. Document was removed' Task {Loading documents} finished with error: Subtask {Opening view for document: BT-20_sorted.bam} is failed: Subtask {Adding document to project: BT-20_sorted.bam} is failed: Subtask {BAM/SAM file import: BT-20_sorted.bam} is failed: Subtask {Convert BAM to UGENE database (BT-20_sorted.bam)} is failed: Converting assembly from BT-20_sorted.bam to BT-20_sorted.bam_debug.ugenedb failed: Error querying database: temporary storage cannot be changed from within a transaction. Document was removed Unregistering task: Loading documents Deleting task: Enable Project Deleting task: Enable 'Project' service Deleting task: Register 'Project' service Deleting task: Register project Deleting task: Open project/document Deleting task: Load BAM info Deleting task: Prepare assembly file to import Deleting task: Convert BAM to UGENE database (BT-20_sorted.bam) Deleting task: BAM/SAM file import: BT-20_sorted.bam Deleting task: Adding document to project: BT-20_sorted.bam Deleting task: Opening view for document: BT-20_sorted.bam Deleting task: Loading documents