Can't run Bowtie test data on Bowtie in UGENE

See http://bowtie-bio.sourceforge.net/tutorial.shtml.

Using the attached test files "e_coli_1000.fa" (reference) and "e_coli_1000.fq" (reads) from the Bowtie package, one can, for example, create an index with the following command:

bowtie-build e_coli_1000.fa e_coli

and launch Bowtie from the command line as follows:

bowtie e_coli reads/e_coli_1000.fq

In this case everything works fine and a sam file is created and can be opened in UGENE.

On the other hand, when Bowtie in launched from the UGENE GUI, a Bowtie error occurs and UGENE informs that Bowtie exited with code "-1073741819" (see screenshots).

As soon as this issue is fixed, an automated test must be added for this test data!