Major When "SAM output" option is set and no reads were aligned then a user see a error:
"Can't detect file format: output.sam"
Replace this message with "The short reads can't be mapped to the reference sequence!"
When "SAM output" option is set and no reads were aligned then a user see a error:
"Can't detect file format: output.sam"
Replace this message with "The short reads can't be mapped to the reference sequence!"