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  1. UGENE
  2. UGENE-1128

Introduce "reference" sequence in MSA Editor

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Major
    • Resolution: Duplicate
    • Affects Version/s: None
    • Fix Version/s: 1.12
    • Component/s: Basic-MSA
    • Affect Type:
      Userdefined

      Description

      • Each sequence in MAlignment can be a "reference" sequence.
      • Highlight the "referenec" sequence somehow (by add drawing border or just drawing a dot near sequence name).
      • User can switch a "reference" sequence by double-clicking on a sequence. Currently the action cause Rename dialog. Substitute the action.
      • It is not neccessery that MSA has a "reference" sequence.
      • Introduce a new highlighting scheme: all variations of non-reference sequences are highligted (like in Assembly Browser)
      • After the issue is closed create "Import variations to file" and "Pairwise alignmetn in MSA" issues.

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            Assignee:
            atiunov Aleksey Tiunov [X] (Inactive)
            Reporter:
            vaskin Yura Vaskin
            Assigned Tester:
            Kirill Rasputin
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              Dates

              Created:
              Updated:
              Resolved: