There is a bug in samtools:
When you sort BAM using it then the header tag SO is not changed to "SO:coordinate" or "SO:queryname", but it is still "SO:unsorted".
Write a request to samtools developers to fix this bug.
There is a bug in samtools:
When you sort BAM using it then the header tag SO is not changed to "SO:coordinate" or "SO:queryname", but it is still "SO:unsorted".
Write a request to samtools developers to fix this bug.