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Type: Bug
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Status: Closed
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Priority: Major
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Resolution: Fixed
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Affects Version/s: 1.11.4
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Component/s: Basic-Nucl
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Affect Type:Userdefined
1. Open "_common_data/fasta/fa1.fa".
2. Click "Smith-Waterman search" on the toolbar.
3. Set any pattern without symbol "T".
4. Select scoring matrix "rna".
5. Start search.
Assertion will not pass: unexpected symbols in sequence.
This matrix is not for the dna alphabet, it shouldn`t shown in the dialog.
There is no crash in release version, but it doesn't allow to use the symbol "T".