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  1. UGENE
  2. UGENE-2488

Support FASTA dbi

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Trivial
    • Resolution: Won't Fix
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: Basic-Other
    • Labels:
    • Affect Type:
      Userdefined

      Description

      Support plain file dbi for avoiding the import of data for the FASTA file format.
      1) The first version on the dbi must provide read-only access to FASTA files.
      2) Each method of the dbi must be covered with unit-tests (3-5 tests per method).
      3) The random access to the file must be optimized (keep the positions of every 10k symbols for each sequence).

      The description of the idea: https://ugene.unipro.ru/wiki/pages/viewpage.action?pageId=3245231

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            Assignee:
            Unassigned
            Reporter:
            ggrekhov German Grekhov
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              Updated:
              Resolved: