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  1. UGENE
  2. UGENE-265

Invent a way to check if input data can be handled by external tool

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.9.4
    • Component/s: None
    • Labels:
    • Affect Type:
      Userdefined

      Description

      The issue is inspired by forum post http://ugene.unipro.ru/forum/YaBB.pl?num=1300429237/2#2

      For example, FormatDB silently fails if the input file is in FASTQ format. We have to somehow prevent such fails, at least, by checking that format of the input file is handled by external tool.

      Steps to reproduce:
      Try to use formatDB tool from BLAST pakage on data/samples/FASTQ/eas.fastq

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            Assignee:
            dkandrov Denis Kandrov
            Reporter:
            iefremov Ivan Efremov
            Watchers:
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              Dates

              Created:
              Updated:
              Resolved: