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  1. UGENE
  2. UGENE-2778

UGENE genome aligner hangs up

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: 1.14
    • Fix Version/s: 1.14
    • Component/s: NGS
    • Tests Type:
      Manual scenario
    • Sprint:
      DEV-19/06/2014, DEV-46-4
    • Affect Type:
      Userdefined

      Description

      1. Use main menu: tools->align to reference->align short reads
      2. Set input parameters
      input sequence: _common_data/genome_aligner/chrY.fa
      short reads: _common_data/genome_aligner/shortreads15Mb.fasta
      mismatches allowed: checked
      3. Press start
      Subtusk "Genome aligner fine task" stops on 4% progress. Task can not be canceled

        Attachments

          Issue Links

          relates to

          Bug - A problem which impairs or prevents the functions of the product. UGENE-5644 Regression: Genome Aligner hangs up

          • Critical - Crashes, loss of data, severe memory leak.
          • Closed

            Activity

              People

              Assignee:
              yalgaer Yuliya Algaer
              Reporter:
              vmalin Vladimir Malinovskiy
              Assigned Tester:
              Yuliya Algaer
              Watchers:
              3 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved:

                  Time Tracking

                  Estimated:
                  Original Estimate - 6 hours
                  6h
                  Remaining:
                  Remaining Estimate - 6 hours
                  6h
                  Logged:
                  Time Spent - Not Specified
                  Not Specified