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Type: Improvement
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Status: Closed
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Priority: Minor
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Resolution: Fixed
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Affects Version/s: 1.13.3
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Fix Version/s: 1.14.1
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Component/s: None
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Labels:None
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Tests Type:GUI automatic
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Sprint:DEV-03/07/2014, DEV-10/07/2014, DEV-17/07/2014
When I try to use _common_data\fasta\titin.fa.gz as input file for Bowtie2 build index, an error occurs:
[ERROR][12:45] Task {Dna assembly task} finished with error: Subtask {DnaAssemblyMultiTask} is failed: Subtask {DnaAssemblyToRefTask} is failed: Subtask {Building genome aligner's index} is failed: Too large sequence, unsupported file format or empty reference in E:/SVN/UGENE/test/_common_data/fasta/titin.fa.gz
UGENE must support all sequence formats and also zipped sequences, so that must be fixed.
Please verify the same issue for other short reads aligners available in the build index dialog.
The issue was inspired by https://www.biostars.org/p/104603/