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  1. UGENE
  2. UGENE-3669

Some cistrome and tuxedo tools throw errors

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.15
    • Fix Version/s: 1.15.1, 1.16
    • Component/s: Workflow
    • Labels:
    • Tests Type:
      Functional/Unit
    • Sprint:
      DEV-20/11/2014, DEV-27/11/2014, DEV-04/12/2014
    • Affect Type:
      Userdefined

      Description

      default parameters and full workfolws are to be used for reproducing

      CEAS: KeyError: 0
      SeqPos: ValueError: -k
      conservation plot: ZeroDivisionError: float division by zero
      cuffdiff: At least 2 sets of assemblies are required fo cuffdiff

      failed tests:
      cistrome:
      cistrome_simple_0001/cistrome_simple_0001.xml
      parameters_variation/test_0001(wig_prof_res=200).xml
      parameters_variation/test_0007(P2G_distance=1000).xml
      parameters_variation/test_0008(Gene_universe=hgu133b).xml

      tuxedo:
      test01.xml
      test_0003(paired).xml
      test_0005(pack).xml

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          Activity

            People

            Assignee:
            atiunov Aleksey Tiunov [X] (Inactive)
            Reporter:
            vmalin Vladimir Malinovskiy
            Assigned Tester:
            Denis Kandrov
            Watchers:
            4 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved:

                Time Tracking

                Estimated:
                Original Estimate - 6 hours
                6h
                Remaining:
                Remaining Estimate - 6 hours
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