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  1. UGENE
  2. UGENE-367

ORF finder: allow to use an alternative (downstream) initiator

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.9.3
    • Fix Version/s: 1.9.4
    • Component/s: Basic-Nucl
    • Labels:
      None
    • Affect Type:
      Userdefined

      Description

      Ad an option to the ORF finder in order to be able to use an alternative ATG (sometimes the real ORF is not the longest). For example:

      ATGCTTCTGGGGATTTTTATGTACAGAAACGCAGAGCTTTTTCAGTCTUAT
      '____________________________________________________________ ORF1
      '---------------------------------______________________________________ ORF2

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            Assignee:
            varlax Alexey Varlamov
            Reporter:
            agu Agustín Ure
            Watchers:
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              Dates

              Created:
              Updated:
              Resolved: