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  1. UGENE
  2. UGENE-4148

BWA: UGENE does not check external tool availability

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.16.2, 1.17
    • Component/s: NGS
    • Labels:
      None
    • Tests Type:
      GUI automatic
    • Sprint:
      DEV-20/03/2015
    • Affect Type:
      Userdefined

      Description

      0. Remove BWA from external tools.
      1. Tools -> NGS data analysis -> Map reads to reference.
      2. Method: BWA.
      3. Reference: samples/FASTA/human_T1.fa.
      4. Reads: samples/FASTA/human_T1.fa.
      5. Start.
      Expected: UGENE offers to choose the path to BWA executables.
      Actual: the task runs and fails.

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            People

            Assignee:
            iprotsyuk Ivan Protsyuk
            Reporter:
            ggrekhov German Grekhov
            Assigned Tester:
            Eugenia Pushkova [X] (Inactive)
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved:

                Time Tracking

                Estimated:
                Original Estimate - 3 hours
                3h
                Remaining:
                Remaining Estimate - 3 hours
                3h
                Logged:
                Time Spent - Not Specified
                Not Specified