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  1. UGENE
  2. UGENE-4198

Bowtie2 crashes on windows XP

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: 1.16.2
    • Fix Version/s: 1.18
    • Component/s: None
    • Environment:

      Windows XP

    • Story Points:
      2
    • Tests Type:
      GUI automatic
    • Sprint:
      DEV-05/08/2015
    • Affect Type:
      Userdefined

      Description

      1. Use main menu:

      {tools->NGS data analysis->map reads to reference}

      2. Fill dialog:
      aligner: bowtie2
      reference: test/_common_data/bowtie2/lambda_virus.fa
      reads: test/_common_data/bowtie2/reads_1.fq

      Ensure that there is no index in "test/_common_data/bowtie2" directory
      3. Run aligner.
      bowtie2 process crashes

      failed tests:
      GUITest_index_reuse_test_0004
      GUITest_index_reuse_test_0006

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            People

            Assignee:
            ggrekhov German Grekhov
            Reporter:
            vmalin Vladimir Malinovskiy
            Assigned Tester:
            Vladimir Malinovskiy
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: