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  1. UGENE
  2. UGENE-4290

Configure MAFFT options when aligning sequences to an alignment

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Trivial
    • Resolution: Won't Fix
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: Basic-MSA
    • Labels:
      None
    • Affect Type:
      Userdefined

      Description

      See UGENE-4067. When a set of sequences is added and aligned to an alignment, the MAFFT tool is used in some cases. It is currently not possible to configure MAFFT parameters:
      1) Accurate aligning / Fast aligning
      2) Allow gaps insertions / Disallow gaps insertions
      3) Reorder sequences
      Consider a way to make a user be able to tweak these options.

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          Issue Links

          relates to

          Improvement - An improvement or enhancement to an existing feature or task. UGENE-4067 Align sequences to an existing alignment in the Alignment Editor

          • Blocker - Blocks development and/or testing work, production could not run.
          • Closed

            Activity

              People

              Assignee:
              Unassigned
              Reporter:
              artyom_s Artyom Savchenko
              Watchers:
              1 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: