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  1. UGENE
  2. UGENE-432

Create various modes of reads higlighting in assembly browser

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.10
    • Component/s: NGS
    • Labels:
    • Affect Type:
      Userdefined

      Description

      Consider implementing the following coloring schemes:
      1. Direct strand - one color, complement - another
      2. Paired reads: a) unpaired b) first in pair c) second in pair d) orphaned (paired, but mate is unmapped)
      3. Everything colored with one color (to easily track mismatches/SNPs)

        Attachments

          Issue Links

          relates to

          New Feature - A new feature of the product, which has yet to be developed. UGENE-549 AB: Highlight differences from reference sequence

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              inovikov Ivan Novikov
              Reporter:
              iefremov Ivan Efremov
              Watchers:
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                Dates

                Created:
                Updated:
                Resolved: