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  1. UGENE
  2. UGENE-4426

UGENE Genome Aligner can't be canceled in some cases

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.16.2
    • Fix Version/s: None
    • Component/s: NGS
    • Labels:
      None
    • Affect Type:
      Userdefined

      Description

      Scenario to reproduce:

      1. Select {Tools -> NGS data analysis -> Map reads to reference}

        in the main menu.
        Expected state: "Align Sequencing Reads" dialog appeared.

      2. Select "UGENE Genome Aligner" method in the dialog;
        Set reference sequence: "_common_data/bwa/NC_000021.gbk.fa";
        Short reads: "_common_data/bwa/nrsf-chr21.fastq";
        Press "Start".
      3. Wait until ShortReadAlignerCPU tasks are on 25% and cancel the top task
        Current state: only one ShortReadAlignerCPU task is canceled, other still have "running" state and wait for something.

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            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            atiunov Aleksey Tiunov [X] (Inactive)
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: