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Type: Improvement
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Status: Closed
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Priority: Minor
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Resolution: Fixed
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Affects Version/s: None
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Fix Version/s: 1.19
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Component/s: None
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Labels:None
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Story Points:1
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Tests Type:GUI automatic
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Epic Link:
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Sprint:DEV-22/09/2015, DEV-14/10/2015, DEV-10/11/2015
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Affect Type:Userdefined
BED format strores annotations in lines, one annotation is described by one line. Therefore, if a line is invalid, it can be skipped and the file can be parsed further.
In the current UGENE version, when a BED file contains an invalid line, the line is skipped and a message is added to the trace log.
The following should be done:
Ensure that the opening failure reasons are correct. If they are incorrect, fix them.
A warning notification must appear. When the notification is clicked, a report is opened. The report contains detailed information about each invalid record: the line number and the problem occurred.