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Type:
Bug
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Status: Closed
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Priority:
Blocker
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Resolution: Cannot Reproduce
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Affects Version/s: 1.19
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Fix Version/s: 1.20
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Component/s: None
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Labels:None
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Story Points:1
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Sprint:DEV-02/12/2015
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Affect Type:Userdefined
1. Open file: "test/_common_data/cmdline/pcr/pcr.uwl"
2. Set these data:
Input sequence: "test/_common_data/cmdline/pcr/begin-end.gb"
Primers: "test/_common_data/cmdline/pcr/primers_anns_1.fa"
3. Run workflow
Bug state: workflow is finished with error: "Failed to detect IO adapter for /home_folder/workflow_output/2015.11.05_17-50_1/report.html"
failed tests:
custom-script-worker-functions/casava_filter/test_0003.xml
custom-script-worker-functions/casava_filter/test_0004.xml
custom-script-worker-functions/fastq_quality_trimmer/test_0001.xml
custom-script-worker-functions/fastq_quality_trimmer/test_0002.xml
custom-script-worker-functions/fastq_quality_trimmer/test_0003.xml
merge_fastq/test_0001.xml
merge_fastq/test_0002.xml
merge_fastq/test_0003.xml
pcr/annotations/test_0001.xml
pcr/annotations/test_0002.xml
pcr/annotations/test_0003.xml
pcr/annotations/test_0004.xml
pcr/annotations/test_0005.xml
pcr/annotations/test_0006.xml
pcr/annotations/test_0007.xml
pcr/test_0003.xml
pcr/test_0004.xml
pcr/test_0007.xml
read_sequence/separator_0001.xml
workflow_samples/raw_ngs/test_0003.xml
workflow_samples/raw_ngs/test_0004.xml
workflow_samples/raw_ngs/test_0005.xml
workflow_samples/raw_ngs/test_0006.xml