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  1. UGENE
  2. UGENE-4984

PDB files downloading should use RESTful API

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    • Affect Type:
      Userdefined

      Description

      Currently, the link to download PDB files is stored in the "data/DBXRefRegistry.txt" file. The second column in the entry is a link to open in the browser, if UGENE can't download and visualize it. The third column is a link to download the file.
      These links should be updated: I have not found our links in the RCSB PDB documentation. Otherwise, there is a RESTful API to work with the database.

      There is an issue related to deprecated links: some IDs become case sensitive. E.g. '1fdl' can be downloaded by UGENE, but '1FDL' cannot.

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            Assignee:
            Unassigned
            Reporter:
            atiunov Aleksey Tiunov [X] (Inactive)
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              Updated:
              Resolved: