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  1. UGENE
  2. UGENE-5045

Configuring "strand" alias for "find-orfs" workflow doesn't work

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    Details

    • Story Points:
      3
    • Sprint:
      DEV-37-2, DEV-37-3, DEV-37-4, DEV-37-5, DEV-37-RELEASE, DEV-38-1, DEV-38-2, DEV-38-3, DEV-38-4, DEV-38-5
    • Affect Type:
      Userdefined

      Description

      There was a request to search for ORFs on the direct strand only, using the "find-orfs" command. I created an issue to add the "strand" parameter to the corresponding workflow was created (UGENE-5044).

      However, when I tried to configure the "strand" alias for the corresponding workflow myself, it didn't work. The alias appeared in the "find-orfs" task help in the command line, but it didn't work, when I specified the parameter, e.g:

      --strand='direct-strand'

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          blocks

          Improvement - An improvement or enhancement to an existing feature or task. UGENE-5044 Add "strand" parameter to "find-orfs" command

          • Major - Major loss of function.
          • Closed

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              People

              Assignee:
              kir Kirill Rasputin
              Reporter:
              oigl Olga Golosova
              Assigned Tester:
              Dmitrii Sukhomlinov
              Watchers:
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                Dates

                Created:
                Updated:
                Resolved: