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  1. UGENE
  2. UGENE-5103

Call variants wizard can produce datasets with the same name

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 43
    • Fix Version/s: 44
    • Component/s: Workflow
    • Labels:
    • Sprint:
      DEV-44-4, DEV-44-5
    • Affect Type:
      Userdefined

      Description

      1. Open WD.
      2. Load the sample "Call variants with SAMtools".
      3. Open wizard.
      4. Set the reference file "data/samples/Assembly/chrM.fa".
      5. Add the assembly file "data/samples/Assembly/chrM.sorted.bam".
      6. Click Next, ..., Apply.
      7. Click the element "Read Sequence".
        Actual state: The name of the dataset is "Dataset 1".
      8. Open wizard.
        Actual state: The name of the dataset is "chrM.fa". Why?
      9. Add a new dataset.
      10. Set the reference file "data/samples/Assembly/chrM.fa".
      11. Add the assembly file "data/samples/Assembly/chrM.sorted.bam".
      12. Click Next, ..., Apply.
      13. Click the element "Read Sequence".
        Actual state: The name of the new dataset is "Dataset 2".
      14. Open wizard.
        Actual state: The name of the new dataset is "chrM.fa".
      15. Add a new dataset.
      16. Set the reference file "data/samples/Assembly/chrM.fa".
      17. Add the assembly file "data/samples/Assembly/chrM.sorted.bam".
      18. Click Next, ..., Apply.
      19. Click the element "Read Sequence".
        Actual state: the names of datasets are "chrM.fa", "chrM.fa", "Dataset 3".
        If you run the workflow it will finish with the error "Not enough assemblies".

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          relates to

          Bug - A problem which impairs or prevents the functions of the product. UGENE-7659 Make renaming datasets in WD correct

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              kir Kirill Rasputin
              Reporter:
              ggrekhov German Grekhov
              Assigned Tester:
              Svetlana Samoilenko
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: