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  1. UGENE
  2. UGENE-5281

HMMER 3: wrong range for --domE

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    • Affect Type:
      Userdefined

      Description

      1. Open a DNA sequence.
      2. Click the menu Actions -> Analyze -> Find HMM signals with HMMMER3.
      3. Open the tab "Reporting threshold".
        => The value of the first parameter can be in [1e-999; 1e+1]. But if you check this parameter (--domE) in "hmmsearch -h" you will see:
        --domE <x> : ... (x>0)

      So it's impossible in UGENE to set domE greater than 10 or you cannot set, for example, 0.2.

      The same thing is in WD.

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              Assignee:
              kir Kirill Rasputin
              Reporter:
              ggrekhov German Grekhov
              Assigned Tester:
              Svetlana Samoilenko
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                Created:
                Updated:
                Resolved: