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  1. UGENE
  2. UGENE-5363

Wrong sequence in local BLAST DB

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: 1.23
    • Fix Version/s: 1.24
    • Component/s: Basic-Nucl, Basic-Protein
    • Labels:
    • Story Points:
      5
    • Tests Type:
      GUI automatic
    • Sprint:
      DEV-24-2
    • Affect Type:
      Userdefined

      Description

      1. Tools --> BLAST --> BLAST make database
      2. Select murine.gb as input file
      3. Check nucleotide radiobox
      4. Set output directory and accept the dialog
        Expected state: the database was created
      5. Open murine.gb
      6. Analyze --> Query with local BLAST
      7. Select the created database and run BLAST
        Current state: there are a few blast result, but the positions of the results are NOT equal to the positions on the murine.
      8. Select some big BLAST result
      9. Fetch sequences from the local BLAST database
        Current state: the fetched sequence contains extra ~1400 characters at the beginning of the original murine sequence

      Find out the reason of that extra symbols and remove them.

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              Assignee:
              epushkova Eugenia Pushkova [X] (Inactive)
              Reporter:
              epushkova Eugenia Pushkova [X] (Inactive)
              Assigned Tester:
              Aleksey Tiunov [X] (Inactive)
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: