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Type: Bug
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Status: Closed
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Priority: Major
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Resolution: Won't Fix
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Affects Version/s: 1.25
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Fix Version/s: None
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Component/s: Basic-Nucl
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Affect Type:Userdefined
Smith-Waterman search can hang GUI for a while, if there are too many results, because the results are sorted in the main thread (see SWAlgorithmTask::getResult method which is called in SWAlgorithmTask::onSubTaskFinished, which is executed in the main thread). Move sorting to a separate thread, e.g by implementing a 'run' method.