Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-554

CAP3: ACE file reverse complement reads error

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.9.5
    • Fix Version/s: 1.9.6
    • Component/s: None
    • Labels:
      None

      Description

      If the ACE file, generated by CAP3 contains identical reverse reads, they are not shown in the alignment.
      For example:
      AF 1 U 2
      BS 1 1 2
      BS 2 210 (short read 2 reverse complement is identical to 1)

      See this thread for more details: http://ugene.unipro.ru/forum/YaBB.pl?num=1313751538

        Attachments

          Activity

            People

            Assignee:
            kokonech Konstantin Okonechnikov
            Reporter:
            kokonech Konstantin Okonechnikov
            Watchers:
            0 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: