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  1. UGENE
  2. UGENE-5620

Message when input reference alphabet is not DNA

    Details

    • Story Points:
      2
    • Epic Link:
    • Sprint:
      DEV-27-6, DEV-27-8
    • Affect Type:
      Userdefined

      Description

      The alphabet of the reference sequence, used to align Sanger reads to may be only "DNA Standard" or "DNA Extended". If it is not so, end the align task with an error and show the following error notification:

      The align task failed: the input reference sequence 'ref_name' contains characters that don't belong to DNA alphabet.

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            kir Kirill Rasputin added a comment -

            Fixed.

            Show
            kir Kirill Rasputin added a comment - Fixed.
            Hide
            dsukhomlinov Dmitrii Sukhomlinov added a comment -

            The Align task ends with this error every time

            Show
            dsukhomlinov Dmitrii Sukhomlinov added a comment - The Align task ends with this error every time
            Hide
            kir Kirill Rasputin added a comment -

            Fixed.

            Show
            kir Kirill Rasputin added a comment - Fixed.
            Hide
            atiunov Aleksey Tiunov [X] (Inactive) added a comment -

            The error message is incorrect if the aligning algorithm is launched from the Workflow Designer.

            Show
            atiunov Aleksey Tiunov [X] (Inactive) added a comment - The error message is incorrect if the aligning algorithm is launched from the Workflow Designer.
            Hide
            yalgaer Yuliya Algaer added a comment -

            Reviewed.

            Show
            yalgaer Yuliya Algaer added a comment - Reviewed.

              People

              Assignee:
              kir Kirill Rasputin
              Reporter:
              oigl Olga Golosova
              Assigned Tester:
              Aleksey Tiunov [X] (Inactive)
              Watchers:
              4 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: