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  1. UGENE
  2. UGENE-5813

SnpEff version validation

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.27
    • Fix Version/s: None
    • Component/s: NGS
    • Affect Type:
      Userdefined

      Description

      SnpEff updates the list of its databases for every new release.
      For example, HIV database is absent in the latest version of snpEff.

      But UGENE cannot validate the older version because of the different version line format.

      snpEff version SnpEff 3.3h (build 2013-08-20), by Pablo Cingolani

      SnpEff version SnpEff 4.3i (build 2016-12-15 22:33), by Pablo Cingolani

      Improve version pattern.

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            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            epushkova Eugenia Pushkova [X] (Inactive)
            Watchers:
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              Dates

              Created:
              Updated:
              Resolved: