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  1. UGENE
  2. UGENE-5830

Counters for new Sanger features

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: 1.27
    • Fix Version/s: 1.28
    • Component/s: None
    • Labels:
      None
    • Story Points:
      3
    • Sprint:
      DEV-28-2, DEV-29-1
    • Affect Type:
      Technical

      Description

      Add the following counters:

      In the "Views" group:

      • Sanger Reads Editor

      In the "Sanger Data Mapping and Opening" group:

      • Selection of the menu item "Tools > Sanger data analysis > Map reads to reference"
      • Opening of the "Trim and map Sanger reads" workflow sample
      • The number of the Sanger reads mapping task launches
      • The number of opening of the ugenedb files with Sanger data

      In the "Sanger Saved Settings" group (the group contains the state of the settings on a Sanger Reads Editor window opening):

      • "Show chromatograms" is checked
      • "Show overview" is checked
      • "Simple extended" consensus type is selected
      • "Strict" consensus type is selected

      In the "Sanger General" group:

      • The number of the "General" tab openings
      • The number of the "Export Alignment without Chromatograms" dialog openings
      • The number of the "Export Alignment without Chromatograms" task launches.

      In the "Sanger Appearance" group:

      • Selection of the "Show chromatogram" item
      • Selection of a "Show/hide trace" item
      • Zoom in
      • Zoom out
      • Reset zoom
      • Increase peaks height
      • Decrease peaks height
      • Change of the font characters font
      • Clear selection

      In the "Sanger Navigation" group:

      • Jump to previous ambiguous character
      • Jump to next ambiguous character
      • Jump to previous variation
      • Jump to next variation

      In the "Sanger Editing" group:

      • Insert character
      • Insert gap using "Insert character/gap"
      • Replace character
      • Replace gap
      • Remove character
      • Remove gap using "Remove character/gap"
      • Insert gap
      • Remove gap at the left
      • Remove all columns of gaps
      • Trim left end
      • Trim right end
      • Rename read
      • Remove read
      • Undo
      • Redo

      In the "Sanger Consensus" group:

      • Opening of the "Consensus" tab
      • Modification of the consensus type or threshold
      • Exporting of consensus

        Attachments

          Activity

            People

            Assignee:
            atiunov Aleksey Tiunov [X] (Inactive)
            Reporter:
            oigl Olga Golosova
            Assigned Tester:
            Dmitrii Sukhomlinov
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: