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  1. UGENE
  2. UGENE-5959

Integrate 7zip, support it for building CLARK database

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    Details

    • Story Points:
      8
    • Sprint:
      DEV-30-1, DEV-30-4
    • Affect Type:
      Userdefined

      Description

      RefSeq data for building CLARK database are downloaded from the UGENE server in the 7zip format (the Qt Installer Framework use this format).

      In the current version of the NGS metagenomes framework it is required to unpack the data. It takes too much disk space.

      Integrate 7zip into UGENE. Modify "Build CLARK Database" so that it can take *.7z reference data as input.

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          relates to

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. UGENE-5976 VIROGENESIS: problems and user experience improvements connected with data

          • Critical - Crashes, loss of data, severe memory leak.
          • Closed

          Bug - A problem which impairs or prevents the functions of the product. UGENE-6053 Path with space when building CLARK database

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Closed

          Task - A task that needs to be done. UGENE-6054 Remove 7zip support for now

          • Major - Major loss of function.
          • Closed

          Improvement - An improvement or enhancement to an existing feature or task. UGENE-5979 Set up "Taxonomy data" in the Application Settings

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Closed

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              Assignee:
              Unassigned
              Reporter:
              oigl Olga Golosova
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: