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  1. UGENE
  2. UGENE-5999

Mode of a Sanger read opening

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      Description

      When an ABIF or SCF file is opened in UGENE, show the following dialog:

      • The dialog title is "Sanger Read Opening Mode".
      • There are three combo boxes inside the dialog, only one of them can be selected at a time:
        • "Open a view for single read"
        • "Map to reference"
        • "Assemble de novo with other reads"
      • The last two items should open a corresponding dialog: "Map Sanger Reads to Reference" / "De Novo Assemble Sanger Reads with CAP". The file is specified in the "Reads" field.
      • If several files have been selected in the file open dialog, all ABIF/SCF files should be added to one dialog.
      • If there is a mix of input file formats (e.g. a user inputs "read1.ab1", "protein.pdb", "read2.ab1"), process the Sanger reads first, then open the other files.

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              Assignee:
              Unassigned
              Reporter:
              oigl Olga Golosova
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