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  1. UGENE
  2. UGENE-6074

Check a DB path for VIROGENESIS tasks

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Won't Fix
    • Affects Version/s: virogenesis
    • Fix Version/s: None
    • Component/s: NGS, Workflow
    • Labels:
    • Affect Type:
      Userdefined

      Description

      When one tries to build a database and specifies an output folder where another database or its draft exists, the workflow works incorrectly. It happens when you launch, for example, the same workflow twice.

      See a comment in UGENE-5836 about the Kraken database. Here is the scenario for CLARK:

      • Add the "Build CLARK database" element to the scene and set some appropriate input data.
      • Run the workflow.
        Current state: you can see in the log that CLARK is executing.
      • Cancel the task.
        Current state: the database is in an invalid state.
      • Launch it again.
        Current state: the workflow ends successfully, but CLARK actually does nothing.

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            Assignee:
            Unassigned
            Reporter:
            epushkova Eugenia Pushkova [X] (Inactive)
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: