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  1. UGENE
  2. UGENE-6219

Some elements produce files with incorrect names in "De novo assembly and contigs classification" workflow sample

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    Details

    • Story Points:
      3
    • Sprint:
      DEV-32-1, DEV-32-5, DEV-32-6
    • Affect Type:
      Userdefined

      Description

      Launch "De novo assembly and contigs classification" sample with some valid data. The "Classify Sequences with Kraken" and "Classification Report" elements should produce files with names based on the input file with reads name. Currently the result files names start with '_' like the input file name is empty.
      The reason could be in "Assemble Reads with SPAdes" element. It is a complex element that manipulates with message context by itself, so there could be something wrong with metadata of the output message.
      Also check that "Ensemble Classification Data" works fine.

        Attachments

        1. one_file_case.png
          282 kB
          Aleksey Tiunov [X]
        2. one_file_case.png
          282 kB
          Aleksey Tiunov [X]
        3. two_files_case.png
          388 kB
          Aleksey Tiunov [X]
        4. two_files_case.png
          388 kB
          Aleksey Tiunov [X]

          Activity

            People

            Assignee:
            dsukhomlinov Dmitrii Sukhomlinov
            Reporter:
            atiunov Aleksey Tiunov [X] (Inactive)
            Assigned Tester:
            Svetlana Samoilenko
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: