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  1. UGENE
  2. UGENE-6334

Validator for the MetaPhlAn2 element empty input slot

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    • Story Points:
      1
    • Epic Link:
    • Sprint:
      DEV-32-7
    • Affect Type:
      Userdefined

      Description

      Scenario:

      1. Open the WD.
      2. Create a workflow: "Read FASTQ Files with PE Reads" > "Classify Sequences with MetaPhlAn2".
      3. In the MetaPhlAn2 element set:
        • "Input data" to "PE reads".
        • "Input file format" to "FASTQ" (if requires, see also UGENE-6311).
      4. In the "Input data" section on the Property Editor, change value of the second slot to empty.
      5. Input a file to the first dataset of the the "Read FASTQ Files with PE Reads" element (not to the second one).
      6. Run the workflow.
        Expected result: the workflow is NOT started, there is the following error in the "Error list" view at the bottom of the WD window:
           Classify Sequences with MetaPhlAn2: The mandatory "Input URL 2" slot is not connected.
           

        Current result: the workflow is started, there is a warning on the dashboard.

      See similar behavior in other classifiers, e.g. Kraken.

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            Assignee:
            dsukhomlinov Dmitrii Sukhomlinov
            Reporter:
            oigl Olga Golosova
            Assigned Tester:
            Svetlana Samoilenko
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              Dates

              Created:
              Updated:
              Resolved: