Update the tool executable. Current version of TopHat does not work properly with the current version Bowtie2 (recently updated).
Make sure TopHat works with both Bowtie and Bowtie2.
Update the tool executable. Current version of TopHat does not work properly with the current version Bowtie2 (recently updated).
Make sure TopHat works with both Bowtie and Bowtie2.