Scenario:
- Make sure MAFFT external tool is set up.
- Open an alignment that contains a sequence with name that has non-ASCII characters (e.g. Russian).
- Click "Align sequence to this alignment" button on the toolbar and select some appropriate sequence.
Expected result: the sequence has been aligned to the alignment.
Current result: an error occurs, the following notification is pop up:'Align sequences to alignment task' task failed: Subtask {Align sequences to alignment task} is failed: Document is empty.
In the "TRACE" category of the log there may be messages like:
MAFFT: Distance 0-230 is strange, 13.304991.
The sequences should be temporarily renames when MAFFT is run. Note that a similar feature is used when multiple sequence alignment is done.
Check also other tasks: pairwise alignment, building a tree, etc.
- relates to
-
UGENE-6541 Add possibility to realign sequence(s) to other sequences in an alignment
- Closed
-
UGENE-6581 Update MAFFT to the most recent version
- Closed