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  1. UGENE
  2. UGENE-6579

Intersect annotations does not work if an annotation group consists of digits only

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    Details

    • Story Points:
      5
    • Sprint:
      DEV-36-4, DEV-36-5, DEV-36-RELEASE, DEV-37-1
    • Affect Type:
      Userdefined

      Description

      Scenario:

      1. Open the WD.
      2. Run sample workflow "Intersect annotations" from the "Scenarios" section with "a.gb" and "b.gb" input files (see the attachment to this issue).
        Expected result: the workflow has been finished successfully, "intersect.gb" file is created.
        Current result: the workflow has been finished with an error:
        Result document is NULL
        

        There is stderr output like this:

        Error: Invalid record in file /var/folders/0l/nvxqy6vn35s9y87800qgsr6c0000gp/T/ugene_tmp/p74459/intersect_annotations/A-D74459.gff. Record is 
        Annotations	-0	18	14	41	.	.	.	name=annA
        

      The problem is that in "a.gb" file "/ugene_group=18".

        Attachments

        1. b.gb
          0.2 kB
        2. a.gb
          0.2 kB

          Activity

            People

            Assignee:
            kir Kirill Rasputin
            Reporter:
            oigl Olga Golosova
            Assigned Tester:
            Svetlana Samoilenko
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: