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  1. UGENE
  2. UGENE-6789

Auto triggered search works very slow on large alignments

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Won't Fix
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: None
    • Labels:
    • Affect Type:
      Userdefined

      Description

      The new search-on-type feature in MSA Editor works very slow on large alignments

      For example: open 10000_sequences.aln file and try to start the search. It takes about 1 minute for the search to complete.

      If a user modifies the alignment: enters a gap or reorders it the search is automatically restarted causing +1 minute 100% CPU hit.

       

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            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            yalgaer Yuliya Algaer
            Watchers:
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              Dates

              Created:
              Updated:
              Resolved: