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  1. UGENE
  2. UGENE-6915

Fix TopHat after Bowtie version update

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 37
    • Component/s: None
    • Labels:
      None
    • Story Points:
      5
    • Sprint:
      DEV-37-5
    • Affect Type:
      Userdefined

      Description

      TopHat is not supported since 2016 and is not compatible with the new Bowtie1 and Bowtie2 tools.

      To deliver both the newest Bowtie tools and a working TopHat we need to include old and compatible Bowtie versions into the TopHat package and run them, instead of the newest ones for all TopHat runs.

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            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            yalgaer Yuliya Algaer
            Assigned Tester:
            Igor Chebykin [X] (Inactive)
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: