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  1. UGENE
  2. UGENE-7006

Crash in GenomeAlignerFindTask

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Duplicate
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: None
    • Labels:
      None
    • Sprint:
      DEV-39-3, DEV-39-4
    • Affect Type:
      Userdefined

      Description

      This issue relates to the crash report №23764.
      Crash occurs in AnnotationGroup.cpp:121 on UGENE version =37.0 on Windows 10.

      The following lines from report reads:

      [Input/Output] SQL: error: Unexpected query result code: 19 (rtree constraint failed: FeatureLocationRTreeIndex.(start<=end)) in query: INSERT INTO FeatureLocationRTreeIndex(id, start, end) VALUES(?1, ?2, ?3)
      
      [Core Services] Trying to recover from error:  Unexpected query result code: 19 (rtree constraint failed: FeatureLocationRTreeIndex.(start<=end)) at C:\BuildAgent\work\release_branch\src\corelibs\U2Core\src\datatype\AnnotationGroup.cpp:121
       
      [Input/Output] SQL: error: SQLite: Error finalizing statement: Error querying database: rtree constraint failed: FeatureLocationRTreeIndex.(start<=end) in query: INSERT INTO FeatureLocationRTreeIndex(id, start, end) VALUES(?1, ?2, ?3) 
      

      See Task tree in the attachment.

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              Assignee:
              kir Kirill Rasputin
              Reporter:
              s.samoilenko Svetlana Samoilenko
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: