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  1. UGENE
  2. UGENE-7044

Crash on save subalignment

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 38
    • Component/s: None
    • Labels:
      None
    • Environment:
      1.  
    • Story Points:
      3
    • Sprint:
      DEV-38-4
    • Affect Type:
      Userdefined

      Description

      The crash occurs in the following scenario:

      1. Open general/common_data/nexus/DQB1_exon4.nexus
      2. Set collapsing mode on
      3. Rename the last two sequences in seqA and seqB
      4. Copy seqA
      5. Select first collapsed mode and click Edit->Paste before
      6. Cut seqB
      7. Select the first sequence and click Edit->Paste before
      8. Select seqB and seqA
      9. Export->Save subalignment
      10. Click OK in the dialog
        Expected state: Save subalignment seqB and seqA(collapsed)
        Actual state:
        Promoting task {Create sub-alignment and open view: DQB1_exon4.nexus} to 'Prepared'
        No row ID '42' in 'DQB1_exon4' alignment!
        Failed to crop an alignment!
        Trying to recover from error: Failed to crop an alignment! at D:\ugene\ugene\src\corelibs\U2Core\src\gobjects\MultipleSequenceAlignmentObject.cpp:151
        Assertion failed: 0, file D:\ugene\ugene\src\corelibs\U2Core\src\gobjects\MultipleSequenceAlignmentObject.cpp, line 151

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            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            yalgaer Yuliya Algaer
            Assigned Tester:
            Svetlana Samoilenko
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: