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Type: Bug
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Status: Open
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Priority: Major
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Resolution: Unresolved
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Affects Version/s: 1.22, 1.23, 1.24, 1.25, 1.26, 1.26.1, 1.26.2, 1.26.3, 1.27, 1.28, 1.28.1, 1.29, 1.30, 1.31, 1.31.1, 1.32, 33, 34, 35, 36, 37, 38, 39, 38.1, 40, 41, 40.1, 42, 43, 44, 45, 46, 47, 48
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Fix Version/s: None
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Component/s: Basic-MSA, Basic-Other
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Labels:
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Environment:
SSE2
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Tests Type:Functional/Unit
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User Requests Number:3
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Affect Type:Userdefined
- Create an alignment with 7000 'A':
- Tools->Random sequence generator...
The "Generate Sequence" dialog appears. - Length=7000
Number of sequences=2
Content=Base content (%)
A=100, C=0, G=0, T=0
Output file=/your/path/out.aln
Format=CLUSTALW - Click "Generate".
The Alignment Editor appears.
- Tools->Random sequence generator...
- Run the SSE2 task:
- Open the Pairwise Alignment tab of the Options Panel.
- Set Sequences.
- Select Algorithm: Smith-Waterman
- Click "Align".
- Wait for the crash. It took 10 minutes on my computer.