[UGENE-8071] [Crash, bam] "sort_blocks fail to create file" in log - Jira

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Type: Bug
Status: Tested
Priority: Major
Resolution: Cannot Reproduce
Affects Version/s: 1.13.1, 1.13.2, 1.13.3, 1.14, 1.14.1, 1.14.2, 1.15, 1.15.1, 1.16, 1.16.1, 1.16.2, 1.17, 1.18, 1.19, 1.20, 1.21, 1.22, 1.23, 1.24, 1.25, 1.26, 1.26.1, 1.26.2, 1.26.3, 1.27, 1.28, 1.28.1, 1.29, 1.30, 1.31, 1.31.1, 1.32, 33, 34, 35, 36, 37, 38, 39, 38.1, 40, 41, 40.1, 42, 43, 44, 45, 46, 47, 48, 49
Fix Version/s: 51
Component/s: NGS
Labels:
- bam
- crash
- crash_report
- regression
- samtools

In the _common_data/bam/ folder, create an empty file more_then_100000_reads.bam_sorted.0.bam without write permissions.
Open in UGENE _common_data/bam/more_then_100000_reads.bam
The "Import BAM File" dialog appears. Click Import.
The "Loading documents" task will start. The error "[sort_blocks] fail to create file /_common_data/bam/more_then_100000_reads.bam_sorted.0.bam" will appear in the Log, then crash.

relates to

UGENE-7747 Update samtools source code