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  1. UGENE
  2. UGENE-8071

[Crash, bam] "sort_blocks fail to create file" in log

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 1.13.1, 1.13.2, 1.13.3, 1.14, 1.14.1, 1.14.2, 1.15, 1.15.1, 1.16, 1.16.1, 1.16.2, 1.17, 1.18, 1.19, 1.20, 1.21, 1.22, 1.23, 1.24, 1.25, 1.26, 1.26.1, 1.26.2, 1.26.3, 1.27, 1.28, 1.28.1, 1.29, 1.30, 1.31, 1.31.1, 1.32, 33, 34, 35, 36, 37, 38, 39, 38.1, 40, 41, 40.1, 42, 43, 44, 45, 46, 47, 48, 49
    • Fix Version/s: None
    • Component/s: NGS
    • Tests Type:
      GUI automatic
    • User Requests Number:
      1
    • Affect Type:
      Userdefined

      Description

      1. In the _common_data/bam/ folder, create an empty file more_then_100000_reads.bam_sorted.0.bam without write permissions.
      2. Open in UGENE _common_data/bam/more_then_100000_reads.bam
      3. The "Import BAM File" dialog appears. Click Import.
      4. The "Loading documents" task will start. The error "[sort_blocks] fail to create file /_common_data/bam/more_then_100000_reads.bam_sorted.0.bam" will appear in the Log, then crash.

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            People

            Assignee:
            biserova Evelina
            Reporter:
            biserova Evelina
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated: