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  1. UGENE
  2. UGENE-8136

"Exclude enzymes found in the exclude region" incorrect behaviour

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    Details

    • Type: Bug
    • Status: Tested
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 51
    • Component/s: None
    • Sprint:
      DEV-51-5, DEV-51-RELEASE
    • Affect Type:
      Userdefined

      Description

      Scenario 1:

      1. Open "clipboard_2.seq"(see attachments).
      2. Open "Restriction enzymes"dialog.
      3. Choose only one "AasI" enzyme.
      4. Check "Uncut area" and set it from 29 to 100.
      5. Click OK.
        Current: an enzyme on 28-39 was found.
        Expected: no enzymes were found.

      Enzyme should be found only if it doesn't intersect the "uncut area".

      Scenario 2:

      1. Open "clipboard_3.fa"(see attachments).
      2. Open "Restriction enzymes"dialog.
      3. Choose only one "AasI" enzyme.
      4. Check "Uncut area" and set it from 50 to 100.
      5. Click OK.
        Expected: no enzymes were found, because the "AasI" enzyme exists inside of the "Uncut area".
      6. Open the log window.
        Expected: there is a sign on the algorithm->info level "The following enzymes were found, but skipped because they are presented inside of the "Uncut area": Aasi."
        Also, please, don't forget to translate this sign to Russian. 

      Scenario 3:

      1. Open any sequence, Restriction sites dialog.
      2. Set Region 5-10, check "Uncut region"and set in "1-20".
      3. Click "OK".
        Currect: Calculation run, nothing found.
        Expected: the "Uncut region"was highlighted in red, the "OK" button of the RS dialog is disabled.

        Attachments

        1. clipboard_2.seq
          0.2 kB
          Dmitrii Sukhomlinov
        2. clipboard_3.fa
          0.2 kB
          Dmitrii Sukhomlinov

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              People

              Assignee:
              kir Kirill Rasputin
              Reporter:
              dsukhomlinov Dmitrii Sukhomlinov
              Assigned Tester:
              Svetlana Samoilenko
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: