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  1. UGENE
  2. UGENE-8152

Export GFF format: . instead of + in the strand (seven) position

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    Details

    • Type: Bug
    • Status: Tested
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 50, 51
    • Fix Version/s: 52
    • Component/s: None
    • Labels:
    • Affect Type:
      Userdefined

      Description

      https://github.com/The-Sequence-Ontology/Specifications/blob/master/gff3.md

      Column 7: "strand"The strand of the feature. + for positive strand (relative to the landmark), - for minus strand, and . for features that are not stranded. In addition, ? can be used for features whose strandedness is relevant, but unknown.

      Scenario:

      1. Open attached gff file.
      2. Strand position (seven) should be "+" instead of ".".

        Attachments

        1. COI_annotations.gff
          0.1 kB
          Svetlana Samoilenko
        2. screenshot-1.png
          7 kB
          Svetlana Samoilenko

          Activity

            People

            Assignee:
            kir Kirill Rasputin
            Reporter:
            s.samoilenko Svetlana Samoilenko
            Assigned Tester:
            Svetlana Samoilenko
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: