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  1. UGENE
  2. UGENE-855

Inlcude size of amplicon in primer annotation

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.11
    • Component/s: Basic-Nucl
    • Labels:
      None
    • Affect Type:
      Userdefined

      Description

      User request, the size of the amplicon should be included as qualifier into the primer annotation.
      The size of the amplicon is calculated as the following:

      ampliconLen = complementPrimer.endPos - forwardPrimer.startPos + 1

      More details available here:
      http://www.abrf.org/ResearchGroups/NucleicAcids/Studies/Assaydesign-Primer3.pdf

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            Assignee:
            kokonech Konstantin Okonechnikov (Inactive)
            Reporter:
            kokonech Konstantin Okonechnikov (Inactive)
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              Dates

              Created:
              Updated:
              Resolved: