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  1. UGENE
  2. UGENE-1439

MUSCLE align to profile failed

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.11.4
    • Fix Version/s: 1.12
    • Component/s: Basic-MSA
    • Labels:
    • Tests Type:
      Manual scenario
    • Affect Type:
      Userdefined

      Description

      1. Download attached files.
      2. Open "NC_000964_multi_region.fa" in MSA Editor.
      3. Do

      {Align->Align sequences to profile with MUSCLE...}

      in context menu.
      4. Select "NC_000964.fa" as profile.
      You will see:
      [ERROR][15:40] Task

      {MUSCLE align 'NC_000964.fa' by profile 'NC_000964_multi_region.fa'}

      finished with error: Subtask

      {MUSCLE add to profile 'NC_000964_multi_region.fa'}

      is failed: Subtask

      {MUSCLE alignment}

      is failed: Internal MUSCLE error: Internal error MSA::ExpandCache, ColCount changed

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              Assignee:
              atiunov Aleksey Tiunov [X] (Inactive)
              Reporter:
              atiunov Aleksey Tiunov [X] (Inactive)
              Assigned Tester:
              Ivan Protsyuk
              Watchers:
              1 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: