Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-1841

Support "Bcftools | vcfutils.pl" pipe

    XMLWordPrintable

    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.13
    • Component/s: Workflow
    • Labels:
    • Tests Type:
      Untestable
    • Affect Type:
      Userdefined

      Description

      Currently these tools work sequentially. Use QProcess pipes for them to improve the performance.

        Attachments

          Issue Links

          blocks

          Task - A task that needs to be done. UGENE-1739 Optimizations of the Call Variants pipeline

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              ggrekhov German Grekhov
              Reporter:
              ggrekhov German Grekhov
              Assigned Tester:
              Ivan Protsyuk
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved:

                  Time Tracking

                  Estimated:
                  Original Estimate - 3 hours Original Estimate - 3 hours
                  3h
                  Remaining:
                  Remaining Estimate - 0 minutes
                  0m
                  Logged:
                  Time Spent - 5 hours
                  5h