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  1. UGENE
  2. UGENE-4065

Embedded samtools can't find prebuilt index if its path contains "bam"

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.16
    • Fix Version/s: 1.19
    • Component/s: NGS
    • Labels:
      None
    • Story Points:
      3
    • Tests Type:
      GUI automatic
    • Sprint:
      DEV-26/02/2015, DEV-05/08/2015, DEV-26/08/2015, DEV-22/09/2015
    • Affect Type:
      Userdefined

      Description

      Embedded samtools can't find an index with name "example_bam.bam.bai" for assembly "example_bam.bam".

        Attachments

          Issue Links

          relates to

          Bug - A problem which impairs or prevents the functions of the product. UGENE-6755 Opening a BAM or SAM file with dots in the file name

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              ggrekhov German Grekhov
              Reporter:
              atiunov Aleksey Tiunov [X] (Inactive)
              Assigned Tester:
              Vladimir Malinovskiy
              Watchers:
              4 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: