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  1. UGENE
  2. UGENE-6755

Opening a BAM or SAM file with dots in the file name

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Cannot Reproduce
    • Affects Version/s: 34
    • Fix Version/s: None
    • Component/s: NGS
    • Labels:
    • Story Points:
      2
    • Sprint:
      DEV-35-1
    • Affect Type:
      Userdefined

      Description

      When a BAM file has dots in the file name, the corresponding *.bai (the index file) is not read properly. For example, download "chrM.sorted.bam" and "chrM.sorted.bam.bai" files, put them into the same folder. When the bam file is opened, there is a message in the import BAM file dialog, see the screenshot.

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              Assignee:
              ichebykin Igor Chebykin
              Reporter:
              oigl Olga Golosova
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                Dates

                Created:
                Updated:
                Resolved: